Xmipp
A suite of image processing programs for single-particle 3D Electron Microscopy & more
Scipion
An image processing framework for 3D Electron Microscopy
3DBIONOTES
Web application designed to automatically annotate biochemical and biomedical information onto structural models.
Electron Microscopy Exchange
Standardize information exchange in single-particle between different 3D-EM software packages.
3DEM Methods
An extensive repository of 3D Electron Microscopy methods